Crystal Structure of the Bifunctional Wax Synthase 1 from <i>Acinetobacter baylyi</i> Suggests a Conformational Change upon Substrate Binding and Formation of Additional Substrate Binding Sites
نویسندگان
چکیده
Wax esters (WE) are neutral lipids that formed by the transesterification of an activated fatty acyl moiety to a alcohol. Due their diverse physicochemical properties, WE used as industrial lubricants, in cosmetics, or for coating. There is substantial interest producing bacteria and plants genetic engineering improve sustainability reduce production costs. However, we lack detailed understanding catalytic mechanism structural determinants influence substrate specificities WE-synthesizing enzymes, which essential tailored production. One class well-studied WE-producing enzymes bifunctional bacterial wax synthases/acyl-CoA:diacylglycerol O-acyltransferases (WSD). Here, report 1.95 Å crystal structure Acinetobacter baylyi WSD1 (AbWSD1) with acid molecule bound active site. The location cocrystallized myristic confirms previously proposed acyl-CoA binding A comparison this AbWSD1 published Marinobacter aquaeolei (MaWSD1) apoenzyme revealed major difference C-terminal part AbWSD1. This leads us propose conformational change induced binding. forms then potential coenzyme (CoA) Furthermore, have identified additional cavity could show through mutational studies two amino acids lining crucial acyl-CoA:diacylglycerol O-acyltransferase (DGAT) activity enzyme. Our findings provide foundation designing WSD variants DGAT activity.
منابع مشابه
Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate.
Although cytochrome P450cam from Pseudomonas putida, the archetype for all heme monooxygenases, has long been known to have a closed active site, recent reports show that the enzyme can also be crystallized in at least two clusters of open conformations. This suggests that the enzyme may undergo significant conformational changes during substrate binding and catalytic turnover. However, these c...
متن کاملCrystal structure of rat liver betaine homocysteine s-methyltransferase reveals new oligomerization features and conformational changes upon substrate binding.
Betaine homocysteine S-methyltransferase (BHMT) is one of the two enzymes known to methylate homocysteine to generate methionine in the liver. It presents a Zn(2+) atom linked to three essential Cys residues. The crystal structure of rat liver BHMT has been solved at 2.5A resolution, using crystals with P2(1) symmetry and 45% solvent content in the cell. The asymmetric unit contains the whole f...
متن کاملCrystal Structure of a Putative Cytochrome P450 Alkane Hydroxylase (CYP153D17) from Sphingomonas sp. PAMC 26605 and Its Conformational Substrate Binding
Enzymatic alkane hydroxylation reactions are useful for producing pharmaceutical and agricultural chemical intermediates from hydrocarbons. Several cytochrome P450 enzymes catalyze the regio- and stereo-specific hydroxylation of alkanes. We evaluated the substrate binding of a putative CYP alkane hydroxylase (CYP153D17) from the bacterium Sphingomonas sp. PAMC 26605. Substrate affinities to C10...
متن کاملSubstrate and drug binding sites in LeuT.
LeuT is a member of the neurotransmitter/sodium symporter family, which includes the neuronal transporters for serotonin, norepinephrine, and dopamine. The original crystal structure of LeuT shows a primary leucine-binding site at the center of the protein. LeuT is inhibited by different classes of antidepressants that act as potent inhibitors of the serotonin transporter. The newly determined ...
متن کاملConformational change of pseudouridine 55 synthase upon its association with RNA substrate.
Pseudouridine 55 synthase (Psi55S) catalyzes isomerization of uridine (U) to pseudouridine (Psi) at position 55 in transfer RNA. The crystal structures of Thermotoga maritima Psi55S, and its complex with RNA, have been determined at 2.9 and 3.0 A resolutions, respectively. Structural comparisons with other families of pseudouridine synthases (PsiS) indicate that Psi55S may acquire its ability t...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: ACS Catalysis
سال: 2022
ISSN: ['2155-5435']
DOI: https://doi.org/10.1021/acscatal.2c01712